Titel
A novel family of plasmid-transferred anti-sense ncRNAs
Autor*in
Sven Findeiss
Department of Computer Science
Autor*in
Cornelius Schmidtke
Martin-Luther-Universität Halle-Wittenberg
... show all
Abstract
The genome of Xanthomonas campestris pv. vesicatoria encodes a constitutively expressed small RNA, which we designate PtaRNA1, "Plasmid transferred anti-sense RNA". It exhibits all hallmarks of a novel RNA antitoxin that proliferates by frequent horizontal transfer. It shows an erratic phylogenetic distribution with occurrences on chromosomes in a few individual strains distributed across both beta-and gamma-proteobacteria. Moreover, a homologous gene located on plasmid pMATVIM-7 of Pseudomonas aeruginosa is found. All ptaRNA1 homologs are located anti-sense to a putative toxin, which in turn is never encountered without the small RNA. The secondary structure of PtaRNA1, furthermore, is very similar to that of the FinP anti-sense RNA found on F-like plasmids in Escherichia coli.
Stichwort
small RNAanti-sense RNAantitoxinplasmid
Objekt-Typ
Sprache
Englisch [eng]
Persistent identifier
https://phaidra.univie.ac.at/o:243984
Erschienen in
Titel
RNA Biology
Band
7
Ausgabe
2
Seitenanfang
120
Seitenende
124
Erscheinungsdatum
01.10.2010
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