Titel
Predictive bioinformatic identification of minor receptor group human rhinoviruses.
Autor*in
Christoph Weber
Medizinische Universität Wien
... show all
Abstract
Major group HRVs bind intercellular adhesion molecule 1 and minor group HRVs bind members of the low-density lipoprotein receptor (LDLR) family for cell entry. Whereas the former share common sequence motives in their viral capsid proteins (VPs), in the latter only a lysine residue within the binding epitope in VP1 is conserved; this lysine is also present in ¿K-type¿ major group HRVs that fail to use LDLR for infection. By using the available sequences three-dimensional models of VP1 of all HRVs were built and binding energies, with respect to module 3 of the very-low-density lipoprotein receptor, were calculated. Based on the predicted affinities K-type HRVs and minor group HRVs were correctly classified.
Objekt-Typ
Sprache
Englisch [eng]
Persistent identifier
https://phaidra.univie.ac.at/o:243857
Erschienen in
Titel
FEBS Letters
Band
583
Ausgabe
15
Seitenanfang
2547
Seitenende
2551
Erscheinungsdatum
01.11.2009
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